Package Bio :: Package expressions :: Module fasta
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Module Bio.expressions.fasta

Function Summary
  make_1id(s, dbname, name)
  make_2id(s, dbname, primary_name, secondary_name)

Variable Summary
MaxRepeat comment_lines = <Martel.Expression.MaxRepeat instance at...
HeaderFooter format = <Martel.Expression.HeaderFooter instance at 0x4...
Group generic_term = <Martel.Expression.Group instance at 0x40...
Seq gnl_id = <Martel.Expression.Seq instance at 0x40867d8c>
Alt id_term = <Martel.Expression.Alt instance at 0x4086c22c>
list ids = [<Martel.Expression.Seq instance at 0x40ab2c2c>, <...
Seq ncbi_term = <Martel.Expression.Seq instance at 0x4086c12...
Group ncbi_word = <Martel.Expression.Group instance at 0x4086c...
Group record = <Martel.Expression.Group instance at 0x4086c6ec...
Seq seqline = <Martel.Expression.Seq instance at 0x4086c56c>
Seq seqline_nonewline = <Martel.Expression.Seq instance at 0...
Group sequence = <Martel.Expression.Group instance at 0x4086c6...
Seq title = <Martel.Expression.Seq instance at 0x4086c46c>

Variable Details

comment_lines

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x4086c2ec>                   

format

Type:
HeaderFooter
Value:
<Martel.Expression.HeaderFooter instance at 0x4086c76c>                

generic_term

Type:
Group
Value:
<Martel.Expression.Group instance at 0x4086c1ec>                       

gnl_id

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x40867d8c>                         

id_term

Type:
Alt
Value:
<Martel.Expression.Alt instance at 0x4086c22c>                         

ids

Type:
list
Value:
[<Martel.Expression.Seq instance at 0x40ab2c2c>,
 <Martel.Expression.Seq instance at 0x4086702c>,
 <Martel.Expression.Seq instance at 0x408671ec>,
 <Martel.Expression.Seq instance at 0x408673ac>,
 <Martel.Expression.Seq instance at 0x4086748c>,
 <Martel.Expression.Seq instance at 0x4086758c>,
 <Martel.Expression.Seq instance at 0x4086776c>,
 <Martel.Expression.Seq instance at 0x4086792c>,
...                                                                    

ncbi_term

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x4086c12c>                         

ncbi_word

Type:
Group
Value:
<Martel.Expression.Group instance at 0x4086c06c>                       

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0x4086c6ec>                       

seqline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x4086c56c>                         

seqline_nonewline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x4086c5ac>                         

sequence

Type:
Group
Value:
<Martel.Expression.Group instance at 0x4086c68c>                       

title

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x4086c46c>                         

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