Package Bio :: Package dbdefs :: Module genbank
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Module Bio.dbdefs.genbank

Variable Summary
Seq diagnostic_error_expr = <Martel.Expression.Seq instance ...
Str error_expr = <Martel.Expression.Str instance at 0x40e336...
DBGroup gb_nucleotide = <Bio.config.DBRegistry.DBGroup instance ...
DBGroup gb_protein = <Bio.config.DBRegistry.DBGroup instance at ...
list ncbi_failures = [(<Martel.Expression.Seq instance at 0x4...
Seq not_exist_expr = <Martel.Expression.Seq instance at 0x40...
EUtilsDB nucleotide_genbank_eutils = <Bio.config.DBRegistry.EUtil...
EUtilsDB protein_genbank_eutils = <Bio.config.DBRegistry.EUtilsDB...
Seq proxy_error_expr = <Martel.Expression.Seq instance at 0x...

Variable Details

diagnostic_error_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x40e3364c>                         

error_expr

Type:
Str
Value:
<Martel.Expression.Str instance at 0x40e3366c>                         

gb_nucleotide

Type:
DBGroup
Value:
<Bio.config.DBRegistry.DBGroup instance at 0x40e3390c>                 

gb_protein

Type:
DBGroup
Value:
<Bio.config.DBRegistry.DBGroup instance at 0x40e33a2c>                 

ncbi_failures

Type:
list
Value:
[(<Martel.Expression.Seq instance at 0x40e3350c>, 'proxy error'),
 (<Martel.Expression.Seq instance at 0x40e3364c>, 'diagnostic error'),
 (<Martel.Expression.Str instance at 0x40e3366c>, 'ERROR'),
 (<Martel.Expression.Seq instance at 0x40eaa48c>,
  "I got HTML and shouldn't have"),
 (<Martel.Expression.Str instance at 0x40e3368c>, 'Please try again la\
ter'),
 (<Martel.Expression.Str instance at 0x40e336ac>, 'Sequence withdrawn'\
...                                                                    

not_exist_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x40e3382c>                         

nucleotide_genbank_eutils

Type:
EUtilsDB
Value:
<Bio.config.DBRegistry.EUtilsDB instance at 0x40e336cc>                

protein_genbank_eutils

Type:
EUtilsDB
Value:
<Bio.config.DBRegistry.EUtilsDB instance at 0x40e3386c>                

proxy_error_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x40e3350c>                         

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